Author: Biotecnika Talent Pool

  • Adithya Namboothiri – Unlocking the Secrets of Biotechnology: Discover My Journey and Expertise!


    Adithya Namboothiri

    (Biotechnologist)

    About Me:

    A keen observer and a biotechnology enthusiast with an appetite for knowledge and a never-say-die attitude towards new journeys ahead. I wish to make the world a better and happy place!

    Contact:

    • Phone: [Phone Hidden]
    • Email: [hidden]
    • Address: A-304, Chaitanya Mahaprabhu CHS Ltd, Kopar Road, Dombivli west, Thane district ŌĆō 421202

    LinkedIn Profile:

    LinkedIn profile : February 13, 2025

  • Sree Vishmaya – Unlocking the Secrets of Genomics: Meet the Master Bioinformatician Transforming Precision Medicine!





    Curriculum Vitae – SREE VISHMAYA

    Professional Summary

    Accomplished Bioinformatician with expertise in genomic data analysis and next-generation sequencing (NGS). Proficient in computational biology, statistical analysis and machine learning, with a strong focus on large-scale omics data interpretation. Dedicated trainer and consultant, providing expert guidance on NGS workflows, data analysis techniques and bioinformatics tools. Current focus on bioinformatics consulting and operations, driving strategic planning and innovation in bioinformatics & IT solutions to advance genomics, precision medicine, and biotechnology.

    Professional Skills

    Bioinformatics & Genomics

    • NGS Data Analysis: DNA-seq, RNA-seq, ChIP-seq, ATAC-seq, Exome-seq, Metagenomics
    • Variant Analysis: SNP/INDEL calling, Structural Variants, CNV analysis, Annotation
    • Transcriptomics: Differential gene expression (DGE), isoform quantification, transcript assembly
    • Functional Genomics: Gene Ontology, pathway enrichment analysis

    Computational Tools & Pipelines

    • Workflow Automation: Nextflow, Galaxy, Docker
    • Bioinformatics Tools: FastQC, Trimmomatic, HISAT2, STAR, BWA, GATK, SAMtools, BEDTools

    Programming & Data Science

    • Languages: Python, R, Bash
    • Data Visualization
    • Machine Learning & Statistics

    Data Engineering & High-Performance Computing

    • HPC Systems: SLURM, parallel computing, job scheduling, resource management

    Project Management & Leadership

    • Team Leadership
    • Consulting & Training
    • Scientific Writing

    Professional Experience

    Bioinformatics & NGS Trainer | NextZen Academy

    • Conducted bioinformatics and NGS training
    • Developed course materials
    • Mentored students

    Head of Operations | Total Outsource Management

    • Spearheaded operational strategies
    • Led cross-functional teams
    • Oversaw resource management

    Bioinformatics Consultant | Freelancing

    • Providing expert guidance and tailored solutions in bioinformatics
    • Assisting in the design and implementation of bioinformatics workflows
    • Supporting clients in genomic data analysis

    Education

    • [hidden] in Bioinformatics | SASTRA Deemed University, Thanjavur | 2021
    • Project: “Machine Learning derived multiclass integrated prognostic scoring model for Acute Leukemia”

    Research Experiences

    • Research Intern | National Institute of Pathology- ICMR, New Delhi
    • Student Researcher | SASTRA Deemed University, Thanjavur, Tamil Nadu
    • Trainee (CSIR-SRTP 2020) | CSIR – NEIST, Jorhat

    Publications

    • Co-Author – “Early Prognosis Prediction in Acute Myeloid and Acute Lymphoid Leukemia”
    • Co-Author – “Analysis of TCGA data for prognosis and risk categorization and survival using bioinformatics”
    • First Author – “Integrated analysis of gene expression data reveals dysregulating factors of SWI/SNF in acute myeloid leukemia”
    • First Author – “Machine Learning derived multiclass integrated prognostic scoring model for Acute Leukemia”
    • Acknowledgement – “Concurrent outcomes from multiple approaches of epistasis analysis for human body mass index associated loci provide insights into obesity biology”

    Scientific Presentations & Lectures

    • Poster Presentation
    • Abstract Submission
    • Paper Presentation
    • Special Lecture
    • Short Presentation

    Certifications

    • Introduction to R Software
    • Microbiology Certificate Course
    • Principles, Statistical and Computational Tools for Reproducible Data Science
    • Emerging Respiratory Viruses, including COVID-19
    • Machine Learning A-Z: Hands-On Python & R in Data Science
    • Leading Change in Health Informatics
    • Next Generation Sequencing (NGS) for Influenza and SARS-CoV-2
    • Train the Trainer: Design Genomics and Bioinformatics
    • Leadership & HR Foundations: Core HR & Leadership styles

    Conferences & Workshops

    • SAMHITHA’18 – National Level Biotechnology Symposium
    • GENOMED 2k19 – National Level Seminar on Medical Genetics
    • PRATYARTH’19 – National Level Symposium on Machine Learning Approaches in Bioinformatics

    Memberships

    • AMBASSADOR – Nextflow Ambassador Program
    • MEMBER – SGAC, AWIS, IAENG, ERGA, NASA-Gene Lab, ISCB – RSG India
    • ORGANIZER – ICSS-2020

    Skills

    Bioinformatics, Genomics, NGS Data Analysis, Variant Analysis, Transcriptomics, Functional Genomics, Computational Tools, Workflow Automation, Data Visualization, Machine Learning, Statistics, Data Engineering, High-Performance Computing, Project Management, Leadership, Consulting, Training, Scientific Writing


    “`

    Cover Letter:

    February 13, 2025

  • Niranjan Kumar – Unlocking Drug Discovery: The Future of Computational Bioinformatics is Here!




    Niranjan Kumar’s CV

    Intro Summary
    Highly dynamic and motivated [hidden] holder in Computational Biology & Bioinformatics with expertise in virtual screening, free energy estimation, structural bioinformatics, and AI/ML applications in public healthcare and drug discovery. Seeking a teaching position with a research focus, possessing excellent communication skills and a keen eye for problem-solving within diverse environments.


    PERSONAL PROFILE

    I am looking for a teaching position with research. I have excellent communication skills and look for a bigger picture while solving a problem. I am strong, independent, and flexible to work in any kind of environment as required. My research focuses on virtual screening and free energy estimation for identifying potential inhibitors against mycobacterium tuberculosis. I am good in structural bioinformatics and also have experience of working with AI/ML for public healthcare and drug discovery. I am a highly dynamic, motivated, and multitasking person, and I know how to perceive any project from beginning to end.


    EDUCATION

    • Jawaharlal Nehru University (JNU), New Delhi, India – [hidden] in Computational Biology & Bioinformatics (SC&IS) 2016-2021
    • Jawaharlal Nehru University (JNU), New Delhi, India – Master of Technology, Computational & Systems Biology 2012-2014
    • [hidden] Central University, Sagar ([hidden]) Madhya Pradesh,India – Master of Science, Biotechnology 2009-2011
    • Magadh University, A N College, Patna, India – Bachelor of Science (Biotech.) 2005-2008

    RESEARCH EXPERIENCE

    • JNU, New Delhi, India – Research Fellow-University Grant Commission (UGC), Govt. of [hidden] Scholar 2016-2021
    • DRDO (INMAS), New Delhi, India – [hidden] Dissertation ([hidden] 2011)

    AWARDS/ACADEMIC ACHIEVEMENTS

    • DBT-fellowship during [hidden] awarded by Department of science and technology, New Delhi
    • ASRB-NET (equivalent to CSIR-UGC-NET), Qualified-2014
    • GATE (XL) Qualified-2011

    [hidden] PUBLICATIONS

    • Niranjan Kumar, Rakesh Srivastava, Amresh Prakash, Andrew M. Lynn. “Structure-based virtual screening molecular dynamics simulation and MM-PBSA towards identifying the inhibitors for Two-component regulatory system protein NarL of Mycobacterium tuberculosis”, Journal of Biomolecular Structure Dynamics, 2019
    • Niranjan Kumar, Rakesh Srivastava, Amresh Prakash, Andrew M. Lynn. Virtual screening and free energy estimation for identifying Mycobacterium tuberculosis flavoenzyme DprE1 inhibitors”, Journal of Molecular Graphics and Modeling, 2020
    • Deep Bhowmik, Rajat Nandi, Rahul Jagadeesan, Niranjan Kumar, Amresh Prakash, Diwakar Kumar. “Identification of potential inhibitors against SARS-CoV-2 by targeting proteins responsible for envelope formation and virion assembly using docking based virtual screening, and pharmacokinetics approaches” Infection, Genetics and Evolution, 2020
    • Niranjan Kumar, [hidden] Identifying the novel inhibitors against the mycolic acid biosynthesis pathway target “mtFabH” of Mycobacterium tuberculosis”, Frontier in Microbiology”, 2022
    • Niranjan Kumar, Rakesh Srivastava. “Deep Learning in Structural Bioinformatics: Current Applications and Future Perspectives”, Briefing in bioinformatics”, 2024

    Presentations in International Conferences/Workshops

    • Niranjan Kumar, High Throughput Virtual Screening and simulation studies to identify potential inhibitors for flavoenzyme decaprenylphosphoryl-β-D-ribose epimerase (DprE1) of Mycobacterium tuberculosis. (Incob 2018), Jawaharlal Nehru University, New Delhi
    • Niranjan Kumar., Hybrid approach to screen chemical libraries against Mycobacterium tuberculosis. International Conference on Bioinformatics and Systems Biology (BSB 2018), Indian Institute of Information Technology, Allahabad
    • Niranjan Kumar, Rakesh Srivastava, Ambresh Prakash, Andrew M Lynn., Identification of potential drug candidates for flavoenzyme decaprenyl- β-D-ribose epimerase (DprE1) of Mycobacterium tuberculosis using silico approaches. In ISCBSC-RSG Indian student symposium 2019 on Computational Biology: Connecting domain of science held on 22nd 2019 at Jawaharlal Nehru University, New Delhi, India.

    Referees

    • Dr. Naveen Kango – Professor & Head, Department of Microbiology, Dr. [hidden] Gour Central University, Sagar, Madhya Pradesh, India
    • Dr. Vineet Kumar Kamal – Assistant Professor, Department of Biostatistics, AIIMS, Kalyani
    • Dr. Basant Kumar Tiwary – Professor, Department of Bioinformatics, Pondicherry University, Puducherry

    Skills

    Keywords: Computational Biology, Bioinformatics, Virtual Screening, Structural Bioinformatics, AI/ML, Research, Problem Solving, Communication



    “`

    Cover Letter:

    February 13, 2025

  • Kadaveru Ramesh – Unleashing Power BI: The Disruptive Thinker Transforming Data into Insights

    KADAVERU RAMESH

    Professional Summary

    Having [hidden]+ years of experience in IT Industry. Experienced in Business Intelligence tools like Power BI (Power BI Desktop and Power BI Service). Skilled in connecting with data sources, performing ETL activities, data modeling, and creating dashboards. Proficient in DAX expressions, Power Pivot, Power View, and Data Gateway operations. Knowledgeable in SQL and various BI functions. Awarded as a Disruptive Thinker in Hexaware Technologies Ltd. Additional qualifications include a Yellow Belt Six Sigma certification.

    Professional Experience

    Senior Lead BI Developer – Hexaware Technologies LTD., Mumbai (June 2022 – January 2025)

    Education

    • Master of Technology ([hidden]) – CVSR College of Engineering, Hyderabad – 2013
    • Bachelor of Technology ([hidden]) – Srinivas Reddy Institute of Technology, Nizamabad – 2009

    Technical Skills

    Technologies: Power BI Desktop, Power BI Service, Power Pivot, Power Automate
    ETL Tool: Power Query
    OLAP Tools: Power Pivot
    Reporting Tools: Power View
    Database: Microsoft SQL Server
    Operating Systems: Windows Family

    Skills
    Power BI: Row-Level Security, Query Optimization, DAX Measures, Filter Functions,
    Schedule Refresh
    Power Automate: Workflow Automation

    Project Details

    Title: Transition Dashboard Client: Hexaware Technologies Ltd. Role: Report Developer Environment: Power BI Desktop, Power BI Service, SQL Server, Excel

    Description: Transition dashboard for internal Transition Team at Hexaware Technologies.

    Roles & Responsibilities

    • Participated in requirements meetings and Scrum Calls.
    • Used Power Query for data transformation.
    • Created Data Model in Power Pivot.
    • Enhanced data models using DAX expressions.
    • Managed report access and security features.

    Project Details

    Title: STG Dashboard Client: Hexaware Technologies Ltd. Role: Report Developer Environment: Power BI Desktop, Power BI Service, SQL Server, Excel

    Description: STG dashboard for internal STG Team at Hexaware Technologies.

    Roles & Responsibilities

    • Participated in requirements meetings and Scrum Calls.
    • Used Power Query for data transformation.
    • Created Data Model in Power Pivot.
    • Developed multiple visual options for each report.
    • Managed report access and security features.

    Project Details

    Title: HR Attrition Analysis Client: Hexaware Technologies Ltd. Role: Report Developer Environment: Power BI Desktop, Power BI Service, SQL Server, Excel

    Description: HR Attrition analysis for Human Resource Department at Hexaware Technologies.

    Roles & Responsibilities

    • Participated in requirements meetings and Scrum Calls.
    • Used Power Query for data transformation.
    • Created Data Model in Power Pivot.
    • Enhanced data models using DAX expressions.
    • Managed report access and security features.

    DECLARATION: I hereby declare that the above-mentioned information is true up to my knowledge and I bear the responsibility for the correctness of the above-mentioned particulars.

    Kadaveru Ramesh

    “`

    Cover Letter:

    <[hidden]>

  • Shubradip Ghosh – Unleashing the Power of Data: Meet the Data Operations Specialist Revolutionizing Business Insights

    Shubradip Ghosh

    Professional Summary

    – Detail-oriented Data Operations Associate with experience in data management, market analysis, and business intelligence.

    – Proficient in SQL, Python, Tableau, and Excel for data processing and visualization.

    – Strong expertise in data validation, process automation, and performance optimization to support business decision-making.

    Key Skills

    • Data Management & Processing (SQL, MySQL, Advanced Excel)
    • Business Intelligence & Visualization (Tableau, Power BI)
    • Market Analysis (Competitor Analysis, Demand Forecasting, Pricing Strategies)
    • Data Cleaning & Transformation (ETL, Data Wrangling, Pandas, NumPy)
    • Database Querying & Optimization (SQL Joins, Stored Procedures)
    • Programming Languages & Softwares (Python, R, SPSS, KNIME)
    • Project & Performance Management

    Education

    • MSc. Biostatistics & Epidemiology, SRMIST 2023
    • BPharm, Jadavpur University 2018
    • PGP in Data Science & Business Analytics, UT Austin 2020

    Professional Experience

    Associate – Data Operations | ICMR-NICPR (Jan 2024 – June 2024)

    • Managed data collection, processing, and validation for public health research.
    • Designed automated reports and dashboards using Tableau and Excel.
    • Performed SQL queries to extract, clean, and analyze large datasets.
    • Ensured data accuracy and compliance with regulatory guidelines.

    AIML Research Intern | Feyn Labs, Guwahati (Dec 2023 – July 2023)

    • Assisted in the implementation of an automated reporting system, reducing manual data processing time by 30%.
    • Conducted market segmentation analysis for AI business prototype building.
    • Prepared reports and presentations summarizing research findings and recommendations.

    Trainee Technical Assistant | Torrent Pharmaceuticals Ltd (Apr 2019 – Sep 2019)

    • Maintained accurate SAP records and updated Standard Operating Procedures (SOPs).
    • Investigated deviations in batch manufacturing and provided corrective actions.
    • Assisted in in-process quality assurance for manufacturing operations.

    Projects & Research

    • Health Insurance Cost Optimization – Developed a predictive model to determine optimal premium pricing.
    • Shoe Sales Forecasting – Built a time series forecasting model using ARIMA & SARIMAX.
    • Customer Segmentation (RFM Analysis) – Improved retention by 20% through personalized targeting.
    • Online Retail Order Analysis (SQL) – Optimized data-driven decision-making for an e-commerce store.
    • Visualizing Insurance Claims using TABLEAU – Created interactive dashboards providing insights for policymaking.
    • Bank Customer Segmentation – Applied clustering techniques for targeted credit card promotions.
    • Insurance Claim Prediction – Compared CART, Random Forest, and ANN models for claims prediction.

    Certifications & Technical Tools

    • Google Data Analytics Certification
    • Data Science & Machine Learning – Skillvertex
    • SQL, Python, R, Tableau, Power BI, Excel
    • AWS, ETL Pipelines, Process Automation
    • Keywords: SQL, Python, Tableau, Data Management, Business Intelligence, Market Analysis, Data Cleaning, Database Querying, Project Management

    “`

    Cover Letter:

    February 13, 2025

  • Jinan Parvin V M – Discover How This Rising Biotechnology Engineer is Revolutionizing Cancer Treatment with Innovative Drug Delivery Systems




    Jinan Parvin V M – CV

    Jinan Parvin V M

    Summary: Biotechnology Engineer with a solid background in cancer biology, molecular biology, and computational biology. Experienced in advanced laboratory techniques and bioinformatics tools for in-silico studies. Skilled in animal cell culture, nanoparticle synthesis, and structural biology methods; eager to contribute to cutting-edge research.

    EDUCATION

    [hidden] in Biotechnology – CGPA [hidden]

    2024

    Relevant Modules: Molecular and Cellular Biology, Stem cell and Tissue Engineering, Bioprocess Engineering, Biostatistics and Quantitative Biology, OMICS Technology, Systems and Synthetic Biology, Biocomputing and Computational Biology, Drug and Vaccine Informatics

    WORK EXPERIENCE

    Research Fellow

    National Institute of Technology Warangal

    July 2023 – June 2024

    Project: Calcium carbonate microparticles show enhanced anti-cancer properties under the influence of a magnetic field

    Key Responsibilities: Synthesis of microparticles, testing anticancer effects, routine maintenance of cancer cell lines

    RESEARCH EXPERIENCE

    Masters’ Thesis: Development of novel drug delivery systems for cancer treatment using a magnetic field

    July 2023 – June 2024

    Developed drug delivery systems using calcium carbonate microparticles and iron oxide nanoparticles

    INTERNSHIPS AND WORKSHOP

    [hidden] in Biotechnology

    National Institute of Technology, Warangal

    GATE Scholarship Recipient

    Experience in RNA sequencing data analysis, WEKA, machine learning algorithms, and bioinformatics tools

    Programming Languages: Python

    SCHOLARSHIPS

    Graduate Aptitude Test in Engineering (GATE) Scholarship (2022-2025)

    PUBLICATIONS

    VM, Jinan Parvin, et al. “Calcium carbonate microparticles show enhanced anti-cancer properties under the influence of magnetic [hidden]#8221; New Journal of Chemistry (2024).

    Link:

    February 13, 2025

  • KAJAL DASILA – Unlocking the Secrets of Aquatic Biodiversity: Meet the Scientist Behind Groundbreaking Research

    KAJAL DASILA

    Educational Qualifications

    Post-Graduation

    Masters in Sciences (Zoology)

    September 2022-July 2024

    Hemvati Nandan Bahuguna Garhwal University, Srinagar Garhwal, Uttarakhand.

    Graduation

    Bachelors in Sciences (Zoology)

    June 2017-December 2020

    Indira Gandhi National Open University, New Delhi

    Higher Secondary

    April 2016-April 2017

    [hidden] Kanya Vidyalya, [hidden], Shakti Nagar

    Secondary

    April 2014-April 2015

    Rajkiya Pratibha Vikas Vidyalya, New Delhi

    Work Experience

    I completed a Master’s Dissertation Project on “Ecological study of Macrozoobenthos in River Mandal, Pauri Garhwal, Uttarakhand” during my post-graduation.

    Skills

    Laboratory Skills, DNA extraction, PCR, Cell Culture, DNA Electrophoresis, DNA isolation, Tissue Culture, Laboratory Instrumentation, Water Quality analysis, Species Identification, Aquatic Biodiversity, Staining Techniques, Sample Analysis

    Declaration

    I hereby declare that all the information provided in this resume is true to the best of my knowledge and belief. I understand that any false statement or misrepresentation may result in disqualification from consideration for employment or termination of employment if discovered after acceptance.

    “`

    Cover Letter:

    <[hidden]>

  • Niranjan M – Unlocking the Secrets of Genomics: A Biotechnology Graduate on a Mission to Transform Healthcare




    Niranjan M

    Summary: As a Biotechnology graduate with a passion for bioinformatics and next-generation sequencing, seeking to apply expertise in wet and dry lab techniques, data analysis, and scientific software to cutting-edge genomic research; committed to contributing innovative, sustainable solutions in healthcare and positively impacting industry and society. Adaptable, multilingual, and detail-oriented, with a strong commitment to research excellence in regenerative medicine, genetics, and immunology.

    Professional Experience

    LifeCell International Pvt. Ltd.

    Chennai, Tamil Nadu, India

    Molecular Genetics Executive

    Responsibilities:

    • Performed DNA and RNA extraction from various sample types using manual and automated methods, ensuring quality control with Nanodrop, Qubit, and Gel Electrophoresis.
    • Conducted quantitative PCR, Y Chromosome Microdeletion assays, and MLPA for gene expression analysis and chromosomal aneuploidy detection, operating advanced genetic analyzers with precision.
    • Documented experimental data in Excel and Batch Production Records (BPR), adhering to Good Laboratory Practices (GLP) and Standard Operating Procedures (SOPs).

    StemCyte India Therapeutics Pvt. Ltd

    Bangalore, Karnataka, India

    Customer Delight Executive

    Responsibilities:

    • Collaborated with gynecologists to discuss advancements in stem cell technology and generate leads, fostering professional relationships.
    • Guided preservation plans for stem cells, ensuring optimal storage strategies and seamless communication between patients and laboratories.
    • Managed client enrollment, payment collection, and agreement signing, while maintaining CRM systems and generating Service and Agreement Reports (SAR).

    Educational Background

    MSc Hons Biotechnology

    CGPA: [hidden]

    BSc Biotechnology

    Percentage: 74%

    12th (PCMB)

    Percentage: 83%

    10th

    CGPA: [hidden]

    Lovely Professional University, Punjab

    Jul 2021 – May 2023

    Nehru Arts & Science College, Coimbatore

    Jul 2018 – May 2021

    State Board of Kerala

    Jun 2017 – May 2018

    Central Board of Secondary Examination

    Jun 2015 – May 2016

    Trainings & Internships

    Rajiv Gandhi Centre of Biotechnology

    Thiruvananthapuram, Kerala, India

    Project Intern – Bioinformatics facility

    Skills:

    • Proficient in Linux/UNIX (Ubuntu) environments, remote machine management (SSH), and programming in Python and R for bioinformatics workflows.
    • Skilled in NGS data analysis, including quality control, pre-processing, and visualization using tools like SeqMonk, IGV, and R ([hidden], ggplots, volcano plots, scatterplots)
    • Worked on HUSH complex-mediated immune response to retroelement invasion, utilizing RNA-seq and CUT&RUN pipelines with tools like Bowtie2, HISAT2, MACS2, SAMtools, Bedtools, and DeepTools.

    Eminent Biosciences

    Indore, Madhya Pradesh, India

    Aug 2024

    Feb 2024- Sep 2024

    Ahalia Hospitals

    Palakkad, Kerala, India

    June – July 2022

    Responsibilities:

    • Isolated DNA from clinical samples and performed PCR to amplify coding and non-coding regions, ensuring accuracy for downstream analyses.
    • Conducted Sanger sequencing for DNA sequence determination; designed and validated primers to improve PCR efficiency and specificity.
    • Annotated genes and performed bioinformatics analyses to interpret sequencing data, utilizing diverse tools and databases to understand gene functions and detect genetic variations.

    Rapture Biotech

    Mumbai, Maharashtra, India

    May 2019

    Feb 2024- Sep 2024

    Responsibilities:

    • Synthesized silver and copper nanoparticles using chemical reduction and green synthesis.
    • Characterized their size, shape, and crystalline structure using UV-Vis spectroscopy, TEM, SEM, and XRD13.
    • Applied bioinformatics tools and databases to analyze genetic and protein data, employing sequence alignment and structural modeling techniques to understand biological functions.

    Certifications & Skills

    • Gel electrophoresis
    • DNA/RNA extraction
    • PCR
    • Genetic analyzer
    • RNA-seq analysis
    • Primer design
    • Gene mapper
    • Bio-Python
    • Bioinformatics & Data analysis
    • Linux Ubuntu environments
    • Shell scripting
    • R programming, Python
    • Sequence alignment



    “`

    Cover Letter:

    February 13, 2025

  • Vamika Karn – Uncover the Biotech Prodigy Shaping the Future of Cancer Research and Machine Learning

    Curriculum Vitae

    Introduction: Vamika Karn is a dedicated professional with a Master’s in Technology in Biotechnology. She has a strong research background and expertise in various aspects of biotechnology, including gene regulation, multi-omics data integration, and machine learning.

    Employment Details

    Aug 2022 – Jan 2024: Research Assistant at Daksh Foundation:

    1. Assisted in providing hands-on training to students in Protein Structure Prediction and Molecular Docking.
    2. Conducted research work on Parkinson’s disease.
    3. Conducted a literature review on Machine Learning algorithms for diagnosing Parkinson’s disease.

    Jan 2024 – June 2024: Dissertation Trainee at Advanced Centre for Treatment, Research and Education in Cancer (ACTREC), Mumbai:

    1. Gene regulator network analysis of cancer-specific biomarkers of clear cell renal cell carcinoma.
    2. Utilized tools such as R, TCGA, and Machine Learning.
    3. Worked on Multi-Omics Data Integration, Network Inference, Network Simulation, Cox Regression, and Survival Analysis.

    Basic Academic Details

    Course Name of Institute Passing Year Percent/CGPA
    M. Tech Biotechnology Amity Institute of Biotechnology (Amity University Mumbai) 2024 [hidden]
    B. Tech Biotechnology Amity Institute of Biotechnology (Amity University Mumbai) 2022 [hidden]
    ISC (XII) Carmel High School 2016 [hidden]
    ICSE (X) Carmel High School 2014 [hidden]

    Internships

    1. Quantium Data Analytics Internship (August 2024): Data Preparation, Experimentation and Uplift Testing, Analytics and Commercial Application.
    2. Summer Intern at Centre for Computational Biology & Translational Research, Amity (July 2023-Aug 2023): Worked on the identification of high-risk genes in Parkinson’s disease.
    3. Project Student at Centre for Computational Biology & Translational Research, Amity University Maharashtra (Jan 2022-May 2022): Performed structural and translational analysis of embB receptor and its mutants for MDR-tuberculosis.

    Skills

    Languages: R, Bash, Python

    Version Control: Git, Github

    Tools and Softwares: GATK, bcftools, samtools, bamtools, STAR, StringTie, Kallisto, PyMOL, AutoDock, Desmond, GROMACS, Chimera, Discovery Studio, Cytoscape

    Methods and Concepts: Multi-Omics Data Integration and Analysis, Machine Learning, Cloud Data Engineering, Basics of Data Science & Analysis, Gene set enrichment (GSEA), Gene Ontology enrichment, Differential Gene expression (DESeq2, EdgeR), Dimensionality reduction (t-SNE, PCA, hierarchical clustering), Sequence Assembly & Alignment (BWA/STAR/BowTie), Gene abundance estimation (HTSeq-counts), Survival Analysis, Mutation and genetic aberration analysis (VarScan2, CNVkit, ClinVar, COSMIC), Statistical Analysis (Pearson/Spearman correlation, Student t-test, Wilcox rank sum test, ANOVA), Protein Structure Prediction & Analysis (I-TASSER, Swiss-Model, ProSA, PDBsum), Protein-Protein Interaction (PPI) Networks (STRING, IntAct, DIP, BioGRID), Functional and Pathway Enrichment (DAVID, Reactome, KEGG)

    Wet Lab Techniques: Autoclave, UV/Vis Spectrometer, Centrifuge, Inverted Microscope, Colorimeter, Potentiometric pH meter, Multi-Mode Plate Reader, PCR, Gel Electrophoresis, UV Visualiser, Biochemical Test, Isolation, identification, and preservation of micro-organisms, MBRT test, Quality Analysis of water and food samples, Serial Dilution, Wine & Xanthan Gum Production, Protein Estimation, Carbohydrate Estimation, Quality Estimation of Amino Acids, Thin Layer Chromatography (TLC), Cell Viability, Staining Methods, Plant tissue sterilization and culture using different explants, Embryo & Anther Culture, Seed viability testing, Animal cell line maintenance, MTT Assay

    Ongoing Research Work

    1. Mutational analysis of first-line drug receptors for MDR tuberculosis.
    2. Genomics and Multi-Omics Analysis of human cancer.

    Courses and Certifications

    1. Gut Check: Exploring your microbiome, Coursera
    2. Computer-Aided Drug Design, Biotechnika
    3. Machine Learning for Beginners, Microsoft, Github
    4. Data Science Course – Mastering the Fundamentals, Scaler
    5. R for Beginners’, Daksh Foundation

    Publications

    1. Extracellular Vesicular miRNA in Pancreatic Cancer: From Lab to Therapy, Cancers, MDPI. (Impact Factor = [hidden])
    2. Mechanistic influence of discreet conformation of human telomerase linker region, Journal of Biomolecular Structure and Dynamics, Taylor & Francis. (Impact Factor = [hidden])
    3. Structural variation and transitional analysis of embB receptor with its mutants leading to drug resistance in tuberculosis, Asian Journal of Microbiology, Biotechnology, & Environmental Sciences. (NAAS Rating = [hidden])
    4. CRISPR/Cas9 system in breast cancer therapy: advancement, limitations and future scope, Cancer Cell International, BMC. (Impact Factor = [hidden])
    5. Extracellular Vesicle-Based Therapy for COVID-19: Promises, Challenges and Future Prospects, Biomedicines, MDPI. (Impact Factor = [hidden])

    Skills: Data Preparation, Experimentation, Uplift Testing, Analytics, Commercial Application, Gene Regulation, Network Analysis, Multi-Omics Data Integration, Machine Learning, Statistical Analysis, Protein Structure Prediction, Wet Lab Techniques

    Cover Letter:

    <[hidden]>

  • Aparna Tiwari – The Scientist Unraveling the Hidden Links Between Malaria and Hypertension!

    **Aparna Tiwari**

    **Education**
    – **[hidden] (Biotechnology)**, ICMR-NIMR and Kumaun University, India, 2016-2022
    – **[hidden] (Biochemistry)**, Jiwaji University, Gwalior, MP, India, 2010-2012
    – **[hidden] (Biotechnology)**, Jiwaji University, Gwalior, MP, India, 2007-2010

    **Awards/Fellowships**
    – **CSIR-UGC NET Junior Research Fellowship**, All India 52nd Rank, 2016

    **Research Experience**
    – **Research Associate (Research and teaching)**, UM-DAE, CEBS, Mumbai, Maharashtra, India, 2022-2024
    – **PhD**, Role of malaria exposure in RAAS polymorphisms and hypertension, ICMR-National Institute of Malaria Research, India, 2017-2022
    – **Healthcare worker in COVID-19 pandemic 2020**
    – **Diagnostic testing**, ICMR-National Institute of Malaria Research, India
    – **COVID-19 Testing**, National Institute of Biologicals, India
    – **Project Research Fellow**, ICMR-National Institute of Malaria Research, India, 2014-2017

    **List of Publications**
    – *Tiwari A, De A, Sinha A. Malaria exposure evolutionarily predisposes to hypertension risk*
    – *Tiwari A, De A, Sinha A, Malaria and Hypertension: What Is the Direction of Association?*
    – *Tiwari A and Ghag SB. Base editing and prime editing in horticulture crops*
    – *Sinha A, Savargaonkar D, De A, Tiwari A, Yadav CP, Anvikar AR. Joint Involvement Can Predict Chikungunya in a Dengue Syndemic Setting in India*
    – *Tiwari A, De A, Sinha A. Increasing blood pressure: could malaria have a role?*
    – *Sinha A, Kar S, Deora N, Dash M, Tiwari A, Kori L, Schneider K, Ranford-Cartwright L. India-EMBO Lecture Course: understanding malaria from molecular epidemiology, population genetics, and evolutionary perspectives*

    **Conference Presentations**
    – *Oral Presentation in International conference on “Fungal interactions with plants and animals: Scoping for the future”*
    – *Oral Presentation in National Conference on Future of Agriculture and Agriculture for future Indian perspective*
    – *Poster presentation in EMBO virtual workshop: The mobile genome: Genetic and physiological impacts of transposable elements*

    **Trainings/ Workshops**
    – *Genomics (NGS, RNA-seq), Proteomics (Mass spec) and Bioinformatics*
    – *Methods in Cancer Biology Research (Immunohistochemistry)*
    – *High-end workshop on flow cytometry and its applications*

    **References**
    1. Dr Abhinav Sinha, Scientist E, ICMR-NIMR, New Delhi, India
    2. Dr Jacinta D’Souza, Professor, UM-DAE CEBS, Mumbai, Maharashtra, India
    3. Dr Poornima Kishore, Associate Professor, Jiwaji University, Gwalior, MP, India

    **Skills and Techniques**
    – *Molecular Biology: Genomics & Proteomics, PCR, qPCR, Next-generation sequencing*
    – *Immunology: ELISA, Immunohistochemistry*
    – *Microbiology: In vitro culture, Banana plant tissue culture*
    – *In vivo techniques: Rodent experimental techniques*
    – *Epidemiology and Public Health: Cohort study, Mendelian Randomization*
    – *Analytical skills*
    – *Writing skills*
    – *Microsoft Word, Excel, PowerPoint*

    **Keywords:** Molecular Biology, Genomics, Proteomics, Immunology, Microbiology, In vivo techniques, Epidemiology, Analytical skills, Writing skills.

    Cover Letter:

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